Managing cotton in cloudy weather
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FNQ

Dear Grower,

 

Happy New Year from Far North Queensland!
We hope you had a great break and are ready for another cotton season. It’s been a wild start—December planting went ahead, and then the skies opened up! If you’ve been watching BOM forecasts like the rest of us, you’ll know the wet isn’t done yet. 

 

Season Kick-Off

Planting kicked off early December across the Tablelands and Julia Creek. Then the monsoon rolled in around Christmas, dropping big totals across the region. Some paddocks are soggy, and a few growers are wondering if they’ll need to replant. 

 

Unlike last year’s dry December, the monsoon arrived early this season, bringing significant rainfall from 24 December across the Tablelands, Julia Creek, and Bowen regions. While heavy rain is typical for the tropics, the intensity and duration have posed challenges for established crops and delayed operations. 

Wet soils may continue to impact planting schedules and other field activities. Some established crops are now at risk of waterlogging if conditions don’t ease soon. Unfortunately, BOM forecasts aren’t promising for clear skies in early January.  

 

The forecast? More of the same for now—cloudy, wet, and humid.  

Current outlooks suggest Queensland has roughly equal chances of above or below-average rainfall, with a slight lean toward wetter conditions from January through March 2026.  

December rainfall summary

FNQ rainfall jan 2026

Data Provided by local FastStart™ Weather Stations in Northern QLD https://tools.csd.net.au/agronomytools/weathernetwork  

fnq jan 2
fnq jan 26 2

Managing cotton in cloudy wet weather

Cloudy and rainy conditions can really change how cotton plants grow. Low sunlight and cooler temperatures often lead to bigger leaves, slower root development, and sometimes square shedding because the plant can’t produce enough energy. The good news? When the sun returns, plants usually compensate—provided they have enough water and nutrition.

 

Key Tips and Considerations for FNQ Growers:

  • Nutrition & Growth Regulators (Mepiquat): Avoid overusing Mepiquat during cloudy periods—it can limit new fruiting sites. If early squares are shed, taller plants with extra nodes will be needed to recover yield.
  • Waterlogging Risks: Wet soils reduce oxygen to roots, slowing growth and nutrient uptake. Watch for yellowing and stunted plants. Waterlogging can also increase sodium uptake and disrupt nutrient balance.
  • Nutrient Management: Waterlogging affects N, Fe, Zn (reduced) and Mn (increased). Foliar N works best just before irrigation under sunny conditions—not during waterlogging. Leaf testing after conditions improve will guide fertiliser decisions.
  • Irrigation Scheduling: After prolonged wet weather, root systems may be smaller. When soils dry, irrigate more frequently with shorter intervals and monitor with moisture probes if possible.
  • Vegetative Growth Management: Due to the indeterminate nature of the cotton plant the vegetative and reproductive growth occur in parallel and it is important to keep the reproductive and vegetative growth in balance. Crops that are too tall and rank are difficult to manage and pick, and higher risk of boll rots and will not yield at its full potential, however short determinate crops may be limited in yield potential and can struggle to compensate if fruit loss occurs during future cloudy periods.  
    • Keep an eye on Vegetative Growth Rate (VGR), fruit retention, and boll size. If crops get too rank, consider small, split mepiquat doses. Avoid combining mepiquat with moisture stress to prevent yield loss.
    • CSD’s CottonTracka® is a very useful tool to help keep your crop on track.
  • Disease Monitoring: Wet, humid conditions favour fungal and bacterial diseases. Seedling diseases (Rhizoctonia, Pythium) can worsen if waterlogging persists for extended periods. Scout regularly and consider preventative fungicides when practical.

Bottom Line: Cloudy weather and waterlogging can set crops back, but careful management of nutrition, irrigation, and growth regulators will help maintain yield potential.

 

Thinking About Replanting? Before you pull the trigger:

  • Check disease pressure (Rhizoctonia, Pythium, black root rot).
  • Know your yield window—later planting means lower potential and micronaire issues in cooler spots.

Handy CSD tools

  • CSD Replant Calculator to assist decision-making 
  • CottonTracka® - Monitor crop development and detect issues early. 

Here to help

If you have any questions or need support with crop management during these challenging conditions, please don’t hesitate to reach out. I’m here to help you make the most of this season. 

jodie

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Cotton Seed Distributors, 'Shenstone', 2952 Culgoora Road, Wee Waa, New South Wales 2388, Australia, 02 6795 0000

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© Cotton Seed Distributors Ltd 2025. General guide only; not comprehensive or specific technical advice. Circumstances vary from farm to farm. To the fullest extent permitted by law, CSD expressly disclaims all liability for any loss or damage arising from reliance upon any information, statement or opinion in this document or from any errors or omissions in this document. ThryvOn™, XtendFlex®, Roundup Ready Flex®, Roundup Ready®, Bollgard II® and Bollgard® 3 are registered trademarks of Monsanto Technologies LLC, used under licence by Monsanto Australia Ltd. Insect control technology incorporated into these seeds is commercialised under a licence from Syngenta Crop Protection AG. Sicot, Sicala, Siokra and Sipima cotton varieties are a result of a joint venture research program, Cotton Breeding Australia, conducted by CSIRO and Cotton Seed Distributors Ltd (CSD). CSD is a partner in the CottonInfo joint venture, in partnership with Cotton Research Development Corporation and Cotton Australia